Sequential Nuggets of Knowledge - DeeVee - SNK-DeeVee
15 April 2008
Person in charge :
FROIDEVAUX Christine
SNK-DeeVee is a data mining tool which detects Sequential Nuggets of Knowledge (SNoK) from a set of sequential data. SNoKs are either softly or strongly constrained, as set by the user. The current application is dedicated to understanding protein domain architecture underlying protein family grouping.
SNK-DeeVee also includes a module for visualising protein architectures verifying the sequential nuggets of knowledge generated by SNK.
Authors : Bastien Rance, Christine Froidevaux and Frédérique Lisacek
SNK has been designed through a collaboration with Frédérique Lisacek (Swiss Institute of Bioinformatics, Geneva).
More information: http://www.lri.fr/~rance/SNK/
Research activities
Data Mining Bioinformatics
Members
FROIDEVAUX Christine RANCE Bastien
Group
